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Physiology and Pathophysiology of the Digestive Tract

The group of Physiology and Pathophysiology of the Digestive Tract focuses its research activity on the functioning of the digestive tract as a whole, including the functions of secretion, motility, absorption and barrier both in healthy individuals and in the presence of disease. The application of knowledge to clinical practice is a priority for the group.

Research in digestive motility encompasses disorders of visceral sensitivity, the brain-gut axis and intestinal allergy. Research on inflammation also includes the pancreas.

We have also launched a cross-sectional research program that focuses on the role of the gut microbiota in inflammation and gut function. 

 

Team

Fco Javier Santos Vicente

Fco Javier Santos Vicente

Head of group
Physiology and Pathophysiology of the Digestive Tract
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Fernando Azpiroz Vidaur

Fernando Azpiroz Vidaur

Main researcher
Physiology and Pathophysiology of the Digestive Tract
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Carmen Alonso  Cotoner

Carmen Alonso Cotoner

Physiology and Pathophysiology of the Digestive Tract
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Carolina Malagelada Prats

Carolina Malagelada Prats

Physiology and Pathophysiology of the Digestive Tract
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Luis Gerardo Alcala Gonzalez

Luis Gerardo Alcala Gonzalez

Predoctoral researcher
Physiology and Pathophysiology of the Digestive Tract
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Ana Maria Gonzalez Castro

Ana Maria Gonzalez Castro

Postdoctoral researcher
Physiology and Pathophysiology of the Digestive Tract
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Fco Javier Santos Vicente

Fco Javier Santos Vicente

Head of group
Physiology and Pathophysiology of the Digestive Tract
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Fernando Azpiroz Vidaur

Fernando Azpiroz Vidaur

Main researcher
Physiology and Pathophysiology of the Digestive Tract
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Carmen Alonso  Cotoner

Carmen Alonso Cotoner

Physiology and Pathophysiology of the Digestive Tract
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Carolina Malagelada Prats

Carolina Malagelada Prats

Physiology and Pathophysiology of the Digestive Tract
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Luis Gerardo Alcala Gonzalez

Luis Gerardo Alcala Gonzalez

Predoctoral researcher
Physiology and Pathophysiology of the Digestive Tract
Read more
Ana Maria Gonzalez Castro

Ana Maria Gonzalez Castro

Postdoctoral researcher
Physiology and Pathophysiology of the Digestive Tract
Read more

Research lines

Gut Microbiota

The human microbiome is the collective genomes of all microorganisms living at the multiple sites of the human body (oral cavity, skin, nasal cavity, gastrointestinal tract (GI) and vagina). Human (Homo sapiens) and their commensal microorganisms have evolved together over the last 200,000 years and have become dependent on one another. Interaction between humans and their symbiotic bacteria is essential to many aspects of normal ‘mammalian’ physiology, ranging from metabolic activity to immune homeostasis, and ecological or genetic changes that disturb this mutualism can result in disease. It reflects the evolutionary selection pressures acting at both the levels of the host and the microbial cells and has a direct profound impact on human health. This line of research aims at understanding the role of the gut microbiome in intestinal disorders using ‘omics approaches.


Our research group proposes a service-collaboration in Microbiome analysis.

You can find further information on our prices at the following URL.

IP: Chaysavanh Manichanh

Hypersensitivity and dysmotility of the gastrointestinal tract

Research has been focused on the origin and mechanisms of the disorders of digestive function. Major advancements have been achieved in relation to the diagnostic  methods to detect neuro-myopathic disorders of the digestive tract. Specifically, an overload test has been developed that increases the sensitivity of intestinal manometry to the detect small bowel motor dysfunction. Non-invasive evaluation of intestinal motility has been approached using an original program of endoluminal image analysis using computer learning techniques and automatic learning methods to videos obtained by means of capsule endoscopy. Furthermore, the possible mechanisms involved in symptoms without apparent cause have been investigated; specifically, the mechanism of abdominal distention has been identified by means of morpho-volumetric analysis of the abdominal; The effects of food and diet on gut function amnd perception in health and disease have been addressed.

IP: Fernando Azpiroz Vidaur

Inflammatory pathways in the gut and therapeutic targets

This research programme includes five projects (supported by Spanish and European public research agencies) aimed at the investigation of the cross-talk and effects of live bacteria of the gut microbiota on the intestinal mucosa. In addition, the programme includes four clinical/physiological studies that address the potential application of new knowledge gained in basic research on inflammatory bowel diseases.

IP: Inflammatory pathways in the gut and therapeutic targets

Neuro-Immuno-Gastroenterology

The irritable bowel syndrome (IBS), the group of microscopical enteritides, food allergy, gastrointestinal eosinophilopaties, and other functional disorders of the gastrointestinal tract represent more than 50% of digestive consultations. Clinical course is chronic and recurrent. However, sensitive and specific diagnostic biological markers are lacking and clinical management is suboptimal as well. Interestingly, a common finding in the intestine of these patients is the presence of barrier dysfunction, mucosal inflammation and immune activation. Moreover, this finding may be related to the onset and severity of some major clinical symptoms, particularly in IBS.

Therefore, our group pursues the detailed comprehension (genetic/gender, immunological, metabolic, cellular and molecular basis) of the mechanisms connecting environmental determinants (stress and infections) to the development of intestinal mucosal microscopical inflammation, with special focus in IBS.

Our approach includes experimental studies in animal models and humans as well, yet remains inherently translational in search for better targets helpful for the diagnosis, prevention and treatment of IBS and related disorders. In addition, preclinical and clinical assays are also being carried out.

IP: Fco Javier Santos Vicente

Projects

Disfunción gastrointestinal, inflamación y patología de sinucleína en pacientes con enfermedad de Parkinson: potencial para el desarrollo diagnóstico y terapéutico.

IP: Ariadna Laguna Tuset
Collaborators: Silvia Enriquez Calzada, Sara Belmonte Calderon, Adriana Zucchiatti Llanos, Sabrina Ayelen Gatti
Funding agency: Instituto de Salud Carlos III
Funding: 265000
Reference: PI24/00253
Duration: 01/01/2025 - 31/12/2027

Hiperinsulinismo congénito: estudios funcionales de variantes genéticas y análisis de factores clínicos y genéticos implicados en la evolución del metabolismo hidrocarbonado a largo plazo

IP: Maria Clemente Leon
Collaborators: María Antolín Mate, Diego Yeste Fernandez, Nuria Gonzalez Llorens, Ariadna Campos Martorell, Cristina Aguilar Riera, Eduard Mogas Viñas
Funding agency: Instituto de Salud Carlos III
Funding: 106250
Reference: PI24/01376
Duration: 01/01/2025 - 31/12/2027

Interacción entre huésped-microbiota y defectos en la integridad de la mucosa intestinal implicados en el origen del daño glomerular en el síndrome nefrótico idiopático

IP: Cristina Martínez Martínez
Collaborators: Alejandro Cruz Gual, Alvaro Domingo Madrid Aris, Ana Maria Gonzalez Castro
Funding agency: Instituto de Salud Carlos III
Funding: 38585.07
Reference: PI21/00757
Duration: 01/01/2022 - 30/06/2026

Modulación de la microbiota intestinal y el sistema inmunológicoModulación de la microbiota intestinal y el sistema inmunológico (MICROBIMM)

IP: Chaysavanh Manichanh
Collaborators: Zaida Soler Luque, Laura Campderros Traver, Sara Vega Abellaneda, Luis Fernando Mayorga Ayala
Funding agency: Ministerio de Ciencia e Innovación-MICINN
Funding: 237500
Reference: PID2023-147387OB-I00
Duration: 01/09/2024 - 31/08/2028

Ministerio de Ciencia

Thesis

Fenotip diferencial de les cèl·lules entèriques glials jejunals en la síndrome de l'intestí irritable

PhD student: Merce Albert Bayo, Merce Albert Bayo
Director/s: Fernando Azpiroz Vidaur
University: Universitat Autònoma de Barcelona
Year: 2023

Fisiologia i Fisiopatologia de la resposta a la ingesta

PhD student: Claudia Barber Caselles
Director/s: Fernando Azpiroz Vidaur
University: Universitat Autònoma de Barcelona
Year: 2023

Integration of fungal and bacterial microbiome sequencing data.

PhD student: Zixuan Xie
Director/s: Chaysavanh Manichanh , Victor Manuel Vargas Blasco
University: Universitat Autònoma de Barcelona
Year: 2023

Evaluación de la motilidad del intesino delgado mediante manometría.

PhD student: Luis Gerardo Alcala Gonzalez, Luis Gerardo Alcala Gonzalez
Director/s: Fernando Azpiroz Vidaur, Carolina Malagelada Prats
University:
Year: 2022

Evaluación de la motilidad del intestino delgado mediante manometría intestinal de alta resolución

PhD student: Luis Gerardo Alcala Gonzalez, Luis Gerardo Alcala Gonzalez
Director/s: Carolina Malagelada Prats, Fernando Azpiroz Vidaur
University:
Year: 2022

Design and validation of a short food frequency questionnaire to relate diet with the gut microbiota

PhD student: Francisca Yañez Araya
Director/s: Chaysavanh Manichanh
University: Universidad Autònoma de Barcelona
Year: 2022

Estudi observacional en colitis ulcerosa per investigar la composició de la microbiotica intestinal en pacients en remisió de llarga durada

PhD student: Claudia Maria Herrera de Guise
Director/s: Francisco Guarner Aguilar
University: Universidad Autònoma de Barcelona
Year: 2021

Utilidad de la ecoendoscopia con contraste en el diagnóstico de lesiones subepiteliales del tracto gastrointestinal alto

PhD student: Monder Abu-Suboh Abadia
Director/s: Manuel Armengol Carrasco, Manuel Armengol Carrasco
University: Universidad Autònoma de Barcelona
Year: 2020

Functional profiling of the human gut microbiome using metatranscriptomic approach

PhD student: Xavier Martínez Serrano
Director/s: Chaysavanh Manichanh
University: Universidad Autònoma de Barcelona
Year: 2020

Mecanismos citotóxicos y humorales implicados en la etiopatogénesis de la esofagitis eosinofílica

PhD student: Marina Fortea Guillamon
Director/s: Maria Vicario Perez, Fernando Azpiroz Vidaur
University: Universidad Autònoma de Barcelona
Year: 2020

Relación entre dieta, función y síntomas digestivos

PhD student: José Wálter Huamán Ríos
Director/s: Ana María Accarino Garaventa, Ana María Accarino Garaventa, Fernando Azpiroz Vidaur
University: Universidad Autònoma de Barcelona
Year: 2020

Metagenómica en la enfermedad inflamatoria intestinal

PhD student: Marta Pozuelo Del Rio
Director/s: Chaysavanh Manichanh
University: Universidad Autònoma de Barcelona
Year: 2019

Implicación del eosinófilo intestinal y producción de factor liberador de corticotropina en la fisiopatología del Síndrome del Intestino Irritable con predominio de diarrea

PhD student: Eloisa Salvo Romero
Director/s: Fco Javier Santos Vicente, Maria Vicario Perez
University: Universidad Autònoma de Barcelona
Year: 2018

Estudio de las alteraciones del microbioma intestinal y extra-intestinal en ratas y humanos durante la progresión de la cirrosis

PhD student: Alba Santiago Badenas
Director/s: Chaysavanh Manichanh
University: Universidad Autònoma de Barcelona
Year: 2018

Molecular Mechanisms and effect of acute and psychosocial stress on the intestinal barrier function. Implications on the iritable bowel syndrome

PhD student: Marc Pigrau Pastor
Director/s: Fco Javier Santos Vicente, Carmen Alonso Cotoner, Maria Vicario Perez
University: Universidad Autònoma de Barcelona
Year: 2018

Mecanismo de producción de los síntomas digestivos funcionales

PhD student: Rogger Alvaro Bendezú García
Director/s: Fernando Azpiroz Vidaur
University: Universidad Autònoma de Barcelona
Year: 2016

Fisiología, fisiopatología y tratamiento de la Distensión abdominal

PhD student: Elizabeth Barba Orozco, Elizabeth Barba Orozco
Director/s: Ana María Accarino Garaventa, Ana María Accarino Garaventa, Fernando Azpiroz Vidaur, Elizabeth Barba Orozco
University: Universidad Autònoma de Barcelona
Year: 2015

Fisiología y Fisiopatología de la distensión abdominal: Gas intestinal

PhD student: Marianela Mego Silva
Director/s: Fernando Azpiroz Vidaur
University: Universidad Autònoma de Barcelona
Year: 2015

Efecto de la administración oral del agente estabilizador del mastocito, cromoglicato disódico, sobre la evolución clínica y biológica en pacientes con síndrome del intestino irritable con predominio de diarrea.

PhD student: Beatriz Lobo Alvarez
Director/s: Fco Javier Santos Vicente, Maria Vicario Perez
University: Universidad Autònoma de Barcelona
Year: 2013

Evaluación de la motilidad intestinal mediante análisis de imágenes endoluminales.

PhD student: Carolina Malagelada Prats, Carolina Malagelada Prats
Director/s: Fernando Azpiroz Vidaur
University: Universidad Autònoma de Barcelona
Year: 2010

Disfunción e inflamación de la mucosa intestinal inducida por el estrés psicosocial crónico y su relevancia translacional para el síndrome del intestino irritable.

PhD student: Carmen Alonso Cotoner
Director/s: Fco Javier Santos Vicente, Joan Ramón Malagelada Benaprés, Joan Ramón Malagelada Benaprés
University: Universidad Autònoma de Barcelona
Year: 2010

Interacciones de las bacterias de la flora con el sistema inmune intestinal

PhD student: Natalia Borruel Sainz, Natalia Borruel Sainz
Director/s:
University: Universidad Autònoma de Barcelona
Year: 2005

Blog

News

Funding has been obtained for 43 projects under the calls for Health R&D&I Projects, Health Technology Development, and Independent Clinical Research

The European project DISCOvERIE, led by Vall d’Hebron, paves the way for more personalized diagnoses and new treatment strategies to improve patients’ quality of life.

15 researchers from the Rheumatology, Systemic Diseases and the Physiology and Pathophysiology of the Digestive Tract groups gave around 25 presentations.